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About GenExpDB
Welcome to the
E. coli
Gene Expression Database (GenExpDB)
Instructions:
Search by gene, locus or location (multiple entries separated by comma or space).
*To start:
enter query or select
Example:
edd
•
b3517
•
laca,lacy,lacz
•
417500
Search by:
Operon
Regulon
Sigma
Annotation
Experiment
MultiFun
Reference Genome set to Ecoli MG1655. Click
Settings
to change RefSeq genome annotation.
Genome:
E. coli MG1655
Query: ( 1 )
b2090
Combined/Averaged (
b2090
): b4498,b2087,b2090
Related (
b2090
):
ECs2893
UTI89_C2363
Z3253
Heatmap of gene expression ratios from all experiments for your query, displayed colorimetrically. Mouseover heatmap bars to display experiment information. Click on heatmap bar to display experiment in:
ScatterPlot
LinePlot
JBrowse
gatR
Exp:
1145 / 1292
Browser
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Annotation
META LINKS
GENE
LOCUS
FEATURE
SYNONYMS
OLD_LOCUSTAG
LEFT END
JOIN
RIGHT END
LEN
DIR
NOTE
--------- Select ---------
ASAP (ABE-0006914, ABE-0006921, ABE-0285099)
Colibri (gatR)
EcoCyc ()
EcoGene (EG12162)
EcoliWiki (gatR)
ExPASy ()
NCBI (2847672)
Kegg (b4498)
UniProt (P36930)
gatR
b4498
gene,CDS
ECK2083; JW2074; JW5340
b2087, b2090
2167717
2167717..2168191,2169453..2169751
2169751
2035
ccw
pseudogene, repressor for gat operon; split galactitol utilization operon repressor, fragment 2; split galactitol utilization operon repressor, interrupted; interrupted by IS3
Accessions
1.1664 sec
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