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About GenExpDB
Welcome to the
E. coli
Gene Expression Database (GenExpDB)
Instructions:
Search by gene, locus or location (multiple entries separated by comma or space).
*To start:
enter query or select
Example:
edd
•
b3517
•
laca,lacy,lacz
•
417500
Search by:
Operon
Regulon
Sigma
Annotation
Experiment
MultiFun
Reference Genome set to Ecoli MG1655. Click
Settings
to change RefSeq genome annotation.
Genome:
E. coli MG1655
Query: ( 1 )
b2621
Heatmap of gene expression ratios from all experiments for your query, displayed colorimetrically. Mouseover heatmap bars to display experiment information. Click on heatmap bar to display experiment in:
ScatterPlot
LinePlot
JBrowse
ssrA
Exp:
1145 / 1292
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Annotation
META LINKS
GENE
LOCUS
FEATURE
SYNONYMS
LEFT END
RIGHT END
LEN
DIR
OPERON
MULTIFUN
PATHWAY
PRODUCT
FUNCTION
NOTE
--------- Select ---------
ASAP (ABE-0008624)
Colibri (ssrA)
EcoCyc (EG30100)
EcoGene (EG30100)
EcoliWiki (ssrA)
ExPASy ()
NCBI (945053)
Kegg (b2621)
UniProt ()
ssrA
b2621
gene,tmRNA
ECK2617; JWR0055; sipB
2753615
2753977
363
cw
ssrA
2.2.6
,
2.3.6
,
6.6
,
7.1
PWY0-1479
tmRNA, 10Sa RNA
2.2.6 information transfer; RNA related; rRNA, stable RNA, 2.3.6 information transfer; protein related; turnover, degradation, 6.6 cell structure; ribosome, 7.1 location of gene products; cytoplasm, RNA; Ribosomal and stable RNAs
acts as tRNA-Ala and mRNA template for tagging proteins resulting from premature transcription termination for degradation, a process known as trans-translation
Accessions
1.2205 sec
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